L. Swint-Kruse, K.S. Matthews, in Encyclopedia of organic Chemistry (Second Edition), 2013

Multiple Sites/Multiple Targets – DNA Looping

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In enhancement to the major operator, LacO, shown in Figure 1, 2 ‘pseudo-operator’ order are present within the lac operon sequence and contribute come repression. The DNA order of the pseudo-operators are really similar, yet not identical, come LacO and are tied by LacI an ext weakly. The visibility of 2 DNA-binding sites in LacI protein tetramer argued a mechanism through which pseudo-operators could enhance repression – one LacI tetramer could bind two different operators and also generate a looped DNA structure. Experimental proof for DNA looping has been obtained from a range of laboratories. Recent evidence indicates the the angle in between the 2 dimers have to open for loop formation to occur, as portrayed in Figure 4. These looped frameworks are very stabilized, accountancy for the far-ranging repression of lacZYA expression observed in bacterial cells. Indeed, DNA containing multiple operator sequences and also with the supercoiling thickness characteristic that E. Coli exhibits a half-life for the complicated that exceeds 2 days. However, also these looped complexes respond promptly (in much less than 30 s) to the presence of inducer sugars, allowing quick adaptation come an outside lactose resource that might be transient.


Figure 4. Looped DNA structure. The teal blue curved line depicts the lac operon DNA (with shading to show nearness come observer), which has three possible LacI-binding sites (two that which, O1 and also O2, are displayed bound come LacI). The pseudo-operator sequence O2 is located within the lacZ gene, and the primary operator succession O1 overlaps the promoter sequence because that the lacZYA metabolic genes (Figure 1). Tetrameric LacI is displayed at the bottom of the number as simultaneously interacting with O1 and O2. This framework loops the DNA and also generates a complex with really high stability.

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Note that the dimers in ~ a LacI tetramer different and adopt a bigger angle between them when looping between O1 and O2 than in the lack of looping (i.e., the structure presented in Figure 3(a)). The need for flexibility in between the dimers because that looping to happen is sustained by speculative evidence.